Task Model¶

Tasks are async Flyte v2 functions that perform a single bioinformatics operation. Each task receives typed Asset inputs, fetches them to disk in parallel, runs a tool against their paths, and registers its outputs as new assets via update(). For the full pattern with code, see Writing a Task.

Conventions¶

• One task per function, one function per operation
• Task files live in src/stargazer/tasks/, named by tool or domain
• Async is preferred for I/O operations
• Resource requests (CPU, memory, GPU) are specified via TaskEnvironment

Available Tasks¶

See the Catalog for a complete list of registered tasks.